Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4296FOG TPR repeat SEL1 subfamily. (367 aa)    
Predicted Functional Partners:
BF49_4298
Fructosebisphosphate aldolase class I EC 41213.
 
    0.876
BF49_4297
Thiaminphosphate pyrophosphorylase EC 2513.
       0.853
BF49_2462
Alginate biosynthesis protein AlgX.
  
 0.844
BF49_6778
Exopolysacchride production negative regulator ExoR.
  
     0.752
BF49_4295
Inositol1monophosphatase EC 31325.
       0.705
BF49_2158
Probable RuBisCoexpression protein CbbX.
   
 0.680
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.650
BF49_1531
Putative heat shock protein YegD.
   
 0.648
BF49_2073
Acetylspermidine deacetylase EC 35148 Deacetylases including yeast histone deacetylase and acetoin utilization protein.
    
  0.599
BF49_2690
Acetylpolyamine aminohydrolase.
    
  0.599
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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