STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4309Isoquinoline 1oxidoreductase alpha subunit EC 139916. (154 aa)    
Predicted Functional Partners:
BF49_4308
Isoquinoline 1oxidoreductase beta subunit EC 139916.
 0.985
BF49_5352
Isoquinoline 1oxidoreductase beta subunit EC 139916.
 0.933
BF49_1952
Isoquinoline 1oxidoreductase beta subunit EC 139916.
 0.932
BF49_7311
Isoquinoline 1oxidoreductase beta subunit EC 139916.
 0.932
BF49_5581
Isoquinoline 1oxidoreductase beta subunit EC 139916.
 0.930
BF49_1367
4hydroxybenzoylCoA reductase alpha subunit EC 139920.
 0.854
BF49_4307
Putative diheme cytochrome c553.
  
 
  0.809
BF49_1226
Isoquinoline 1oxidoreductase beta subunit EC 139916.
 
 0.800
BF49_5989
Aerobic carbon monoxide dehydrogenase molybdenum cofactor insertion protein CoxF.
 
 
 0.762
BF49_5988
Xanthine and CO dehydrogenases maturation factor XdhCCoxF family.
 
 
 0.694
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.