Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4311Twocomponent hybrid sensor and regulator. (661 aa)    
Predicted Functional Partners:
BF49_3244
Chemotaxis protein methyltransferase CheR EC 21180.
 
 
 0.935
BF49_1446
Sensory box histidine kinaseresponse regulator.
 
 
 0.880
BF49_2142
Twocomponent hybrid sensor and regulator.
 
 0.868
BF49_0463
Twocomponent response regulator.
 
 
  0.800
BF49_0768
Twocomponent response regulator.
 
 
  0.794
BF49_2207
Twocomponent response regulator.
 
 
 0.788
BF49_1930
Twocomponent nitrogen fixation transcriptional regulator FixJ.
 
 
 0.783
BF49_1931
Transcriptional regulatory protein fixJ.
 
 
 0.782
BF49_0453
Twocomponent response regulator.
 
 
  0.772
BF49_0461
Twocomponent response regulator.
 
 
 0.756
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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