Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4332Probable substratebinding protein. (527 aa)    
Predicted Functional Partners:
BF49_4333
Adenosine deaminase EC 3544 alternative form.
 
     0.843
BF49_1402
Dipeptide transport system permease protein DppC TC 3A152.
 
 0.836
BF49_6952
Cell processes transport of small molecules amino acids amines peptides.
  
  
  0.832
BF49_4075
Dipeptidebinding ABC transporter periplasmic substratebinding component TC 3A152.
  
  
  0.811
BF49_4327
ABC transporter permease protein.
    
 0.787
BF49_6052
Dipeptide transport system permease protein DppC TC 3A152.
 
 0.777
BF49_4329
ABCtype polar amino acid transport system protein substratebinding protein.
  
 
 0.772
BF49_1403
Dipeptide transport system permease protein DppB TC 3A152.
 
 0.770
BF49_4330
FIG00439920 hypothetical protein.
 
     0.759
BF49_4331
Hydantoin racemase EC 5199.
 
     0.752
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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