Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4333Adenosine deaminase EC 3544 alternative form. (457 aa)    
Predicted Functional Partners:
BF49_4330
FIG00439920 hypothetical protein.
 
   
 0.844
BF49_4332
Probable substratebinding protein.
 
     0.843
BF49_4331
Hydantoin racemase EC 5199.
 
   
 0.790
BF49_4329
ABCtype polar amino acid transport system protein substratebinding protein.
 
     0.743
BF49_4325
NcarbamoylDamino acid hydrolase EC 35177 putative.
 
   
 0.650
BF49_5468
Xanthine dehydrogenase molybdenum binding subunit EC 11714.
 
 
 0.621
hutH
Histidine ammonialyase EC 4313.
  
 
 0.586
hutI
Imidazolonepropionase EC 3527.
  
 
 0.578
BF49_3159
Nformylglutamate deformylase EC 35168.
  
 
 0.564
BF49_4328
ABCtype polar amino acid transport system protein ATPbinding protein.
     
 0.551
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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