Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_4339ABCtype spermidineputrescine transport system permease component II. (268 aa)    
Predicted Functional Partners:
BF49_4337
Putrescine transport ATPbinding protein PotA TC 3A1111; Belongs to the ABC transporter superfamily.
 
 0.988
BF49_4336
ABC transporter substratebinding protein.
 
 0.986
BF49_4338
Bindingproteindependent transport systems inner membrane component precursor.
0.977
BF49_5002
Spermidine Putrescine ABC transporter permease component PotB TC 3A1111.
 0.968
BF49_4426
Putrescine transport system permease protein PotH TC 3A1112.
 0.964
BF49_1243
Putrescine ABC transporter putrescinebinding protein PotF TC 3A1112; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 0.960
BF49_4855
ABC transporter permease protein.
 
 0.953
BF49_6077
ABC transporter permease protein.
 
 0.951
BF49_1342
ABC transporter ATPbinding protein; Belongs to the ABC transporter superfamily.
 
 0.946
BF49_1343
ABC transporter periplasmic spermidine putrescinebinding protein PotD TC 3A1111.
 
 0.946
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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