STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4340Opine oxidase subunit B. (378 aa)    
Predicted Functional Partners:
BF49_4342
Opine oxidase subunit A.
 0.990
BF49_4341
Opine oxidase subunit C.
 
 
  0.943
BF49_4336
ABC transporter substratebinding protein.
 
   
 0.907
BF49_4338
Bindingproteindependent transport systems inner membrane component precursor.
 
    0.851
BF49_4339
ABCtype spermidineputrescine transport system permease component II.
 
     0.850
BF49_4337
Putrescine transport ATPbinding protein PotA TC 3A1111; Belongs to the ABC transporter superfamily.
 
  
 0.829
BF49_4343
Sarcosine oxidase beta subunit EC 1531.
 
   
0.828
BF49_4334
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
 
     0.820
BF49_4344
RidAYER057cUK114 superfamily group 2 YoaBlike protein.
 
  
 0.781
BF49_5886
Aminomethyltransferase glycine cleavage system T protein EC 21210.
  
 0.761
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.