STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobB-3NADdependent protein deacetylase of SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. (268 aa)    
Predicted Functional Partners:
BF49_4348
Glucose 1dehydrogenase EC 11147.
   
   0.635
BF49_5854
TolA protein.
    
 0.624
BF49_1802
Phenylacetic acid degradation operon negative regulatory protein PaaX.
   
    0.591
BF49_0541
ATPdependent DNA helicase RecQ.
  
 
 0.587
BF49_0714
TfoX domain protein.
   
   0.572
BF49_4924
Transcriptional regulator AraC family.
  
  
 0.563
BF49_2073
Acetylspermidine deacetylase EC 35148 Deacetylases including yeast histone deacetylase and acetoin utilization protein.
    
 
 0.546
BF49_2690
Acetylpolyamine aminohydrolase.
    
 
 0.546
BF49_2142
Twocomponent hybrid sensor and regulator.
  
 0.513
BF49_5936
COG2110 Macro domain possibly ADPribose binding module.
 
 0.512
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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