STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4352TRAP transporter solute receptor unknown substrate 5. (332 aa)    
Predicted Functional Partners:
BF49_4353
TRAP dicarboxylate transporter DctQ subunit unknown substrate 5.
 
  
  0.983
BF49_4354
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
 
 
 0.970
BF49_6994
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
 
 
 0.919
BF49_5116
TRAPtype transport system small permease component predicted Nacetylneuraminate transporter.
 
 
 0.871
BF49_6993
TRAP dicarboxylate transporter DctQ subunit unknown substrate 5.
 
 
 0.799
BF49_1940
TRAPtype C4dicarboxylate transport system large permease component.
 
 
 0.794
BF49_1889
TRAPtype C4dicarboxylate transport system large permease component.
 
 
 0.791
BF49_6997
Predicted gluconate TRAP family transporter DctM subunit.
 
 
 0.790
BF49_4841
TRAPtype transport system large permease component predicted Nacetylneuraminate transporter.
 
 
 0.769
BF49_5578
TRAPtype C4dicarboxylate transport system large permease component.
 
 
 0.765
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.