STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4397FIG00451076 hypothetical protein; Belongs to the UPF0335 family. (90 aa)    
Predicted Functional Partners:
BF49_5156
FIG00443822 hypothetical protein.
  
   
 0.802
BF49_3350
Bll1313 protein.
  
   
 0.765
atpF
ATP synthase F0 sector subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.745
BF49_0086
FIG041266 ATPdependent nuclease subunit B.
  
     0.725
BF49_0087
FIG061771 ATPdependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
  
     0.720
recO
DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.704
BF49_2293
Znribboncontaining possibly RNAbinding protein and truncated derivatives.
  
     0.686
secE
Preprotein translocase subunit SecE TC 3A511; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.685
BF49_0126
Glutathione Stransferase family protein.
  
     0.676
BF49_0961
DNA polymerase III chi subunit EC 2777.
  
     0.660
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.