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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4401Oligoendopeptidase F EC 3424. (634 aa)    
Predicted Functional Partners:
BF49_4400
Nitrogen regulation protein NRI.
       0.586
metXA
Homoserine Oacetyltransferase EC 23131; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
    0.581
BF49_6546
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.579
BF49_3375
FIG00443876 hypothetical protein.
   
    0.574
BF49_5254
Homoserine Oacetyltransferase EC 23131.
  
  
 0.551
BF49_4788
Flagellar motor switch protein FliM.
   
   0.541
BF49_5818
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
   
   0.541
BF49_1527
3carboxyciscismuconate cycloisomerase EC 5512.
  
    0.519
BF49_4053
3carboxyciscismuconate cycloisomerase EC 5512.
  
    0.519
BF49_4126
Homoserine Oacetyltransferase EC 23131; Belongs to the AB hydrolase superfamily. MetX family.
   
    0.519
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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