STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4401Oligoendopeptidase F EC 3424. (634 aa)    
Predicted Functional Partners:
BF49_4400
Nitrogen regulation protein NRI.
       0.605
metXA
Homoserine Oacetyltransferase EC 23131; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
    0.572
BF49_6546
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.543
BF49_5254
Homoserine Oacetyltransferase EC 23131.
  
  
 0.540
BF49_3375
FIG00443876 hypothetical protein.
   
    0.537
BF49_1527
3carboxyciscismuconate cycloisomerase EC 5512.
  
    0.518
BF49_4053
3carboxyciscismuconate cycloisomerase EC 5512.
  
    0.518
BF49_5952
Adenylosuccinate lyase EC 4322; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
    0.518
BF49_5982
3carboxyciscismuconate cycloisomerase EC 5512.
  
    0.518
BF49_4126
Homoserine Oacetyltransferase EC 23131; Belongs to the AB hydrolase superfamily. MetX family.
   
    0.509
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.