STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4410Protein export cytoplasm protein SecA ATPase RNA helicase TC 3A511. (94 aa)    
Predicted Functional Partners:
BF49_4409
Calciumproton antiporter.
       0.685
BF49_4407
FIG00442767 hypothetical protein.
  
    0.553
BF49_4411
FIG00853353 hypothetical protein.
       0.546
BF49_4408
Probable transmembrane protein.
     
 0.492
BF49_0904
Acetylornithine deacetylase EC 35116.
 
    0.436
BF49_3428
Transcriptional regulator PhnF.
  
    0.405
BF49_3760
ATPdependent DNA ligase EC 6511.
 
 
   0.405
BF49_5332
Histidine utilization repressor.
  
    0.405
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.