STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4411FIG00853353 hypothetical protein. (313 aa)    
Predicted Functional Partners:
BF49_5407
Outer membrane receptor proteins mostly Fe transport.
   
 0.738
BF49_0231
Cell division protein FtsK.
   
 
 0.718
BF49_0424
Carboxylterminal protease EC 3421102; Belongs to the peptidase S41A family.
  
 0.674
BF49_6733
Carboxylterminal protease family protein; Belongs to the peptidase S41A family.
  
 0.674
BF49_6381
Chemotaxis protein methyltransferase CheR EC 21180.
   
 
 0.565
BF49_2471
Hypothetical protein.
     
 0.557
BF49_2680
Endo14betaxylanase A precursor EC 3218.
     
 0.557
BF49_4410
Protein export cytoplasm protein SecA ATPase RNA helicase TC 3A511.
       0.548
BF49_4409
Calciumproton antiporter.
       0.541
BF49_6501
Possible outer membrane protein possible porin precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
   
 
  0.534
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.