STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4420Protein of unknown function DUF465. (68 aa)    
Predicted Functional Partners:
BF49_4421
FIG00439673 hypothetical protein.
       0.594
rpmJ
LSU ribosomal protein L36p; Belongs to the bacterial ribosomal protein bL36 family.
 
     0.582
BF49_4419
FIG00439959 hypothetical protein.
       0.513
BF49_2987
FIG00449860 hypothetical protein.
  
     0.485
BF49_4418
FIG00440675 hypothetical protein.
       0.472
BF49_1670
DNA polymeraselike protein PA0670.
  
     0.457
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
  
     0.418
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.