STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4436FIG00794837 hypothetical protein. (357 aa)    
Predicted Functional Partners:
BF49_0391
Aconitate hydratase EC 4213; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.941
BF49_1200
4oxalmesaconate hydratase EC 42183.
 
  
 0.872
BF49_1199
4carboxy4hydroxy2oxoadipate aldolase EC 41317.
 
   
 0.829
BF49_1201
2pyrone46dicarboxylic acid hydrolase.
 
  
 0.812
BF49_6364
Bll5266 protein; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily.
 
  
 0.784
BF49_3410
Putative 2pyrone46dicarboxylic acid hydrolase.
 
  
 0.777
BF49_1663
Putative 2pyrone46dicarboxylic acid hydrolase.
 
  
 0.768
BF49_4435
LysR family transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
 
  
 0.697
BF49_1197
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
 
    0.653
BF49_3084
InterPro IPR006992 COGs COG2159.
 
  
 0.649
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.