STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4451Aspartate ammonialyase EC 4311. (558 aa)    
Predicted Functional Partners:
BF49_5180
FIG00439865 hypothetical protein.
 
     0.646
BF49_1176
Transcriptional regulatory protein.
  
     0.506
BF49_1177
Transcriptional regulatory protein.
  
     0.502
BF49_6087
FIG00445664 hypothetical protein.
  
     0.496
BF49_3570
Hypothetical protein.
  
     0.483
BF49_4450
Twocomponent response regulator.
       0.474
BF49_1420
Outer membrane vitamin B12 receptor BtuB.
  
     0.469
BF49_2517
Protein gp47 recombinationrelated Bacteriophage A118.
  
     0.428
BF49_4189
Hypothetical protein.
  
     0.422
BF49_4560
Hypothetical protein.
  
     0.416
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.