STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4455Cyclase. (257 aa)    
Predicted Functional Partners:
BF49_4454
Blr7068 hypothetical protein.
       0.618
BF49_4453
Hypothetical protein.
       0.573
BF49_4051
Adenylate cyclase EC 4611.
  
     0.516
BF49_3015
Adenylate cyclase EC 4611.
 
     0.480
BF49_4047
Adenylate cyclase EC 4611.
 
     0.463
BF49_3572
FIG01200701 possible membrane protein.
  
   
 0.460
BF49_4398
Protein of unknown function DUF882.
  
    0.437
BF49_2692
FIG00440014 hypothetical protein.
  
 
  0.426
BF49_4452
FIG00444883 hypothetical protein.
       0.419
BF49_7210
Interalphatrypsin inhibitor domain protein.
  
     0.410
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.