STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDLipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (227 aa)    
Predicted Functional Partners:
BF49_4468
Lipoprotein releasing system transmembrane protein LolC.
 
 0.996
BF49_6323
Macrolide export ATPbindingpermease protein MacB EC 363.
 0.986
BF49_6689
Lipoprotein releasing system transmembrane protein LolC.
 
 0.966
BF49_6669
Lipoprotein releasing system transmembrane protein LolC.
  
 0.961
BF49_4467
Macrolidespecific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.916
lolD-2
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  
 
0.909
BF49_6966
ABCtype antimicrobial peptide transport system permease component.
  
 0.812
BF49_6965
ABCtype antimicrobial peptide transport system permease component.
 
 0.796
BF49_4605
ABCtype antimicrobial peptide transport system permease component.
  
 0.795
rpsK
SSU ribosomal protein S11p S14e; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
 
   
 0.695
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.