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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrBPeptide methionine sulfoxide reductase MsrB EC 18412. (139 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase MsrA EC 18411; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.996
msrA-2
Peptide methionine sulfoxide reductase MsrA EC 18411; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.992
msrA-3
Peptide methionine sulfoxide reductase MsrA EC 18411; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.992
rplT
LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.654
BF49_0340
Succinate dehydrogenase cytochrome b556 subunit.
   
  
 0.609
BF49_0339
Succinate dehydrogenase hydrophobic membrane anchor protein.
   
    0.587
rplK
LSU ribosomal protein L11p L12e; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
 
 0.586
rpmG
LSU ribosomal protein L33p LSU ribosomal protein L33p zincindependent; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.577
rpmJ
LSU ribosomal protein L36p; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.570
rpsI
SSU ribosomal protein S9p S16e; Belongs to the universal ribosomal protein uS9 family.
   
   0.569
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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