Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_4499Acetylornithine deacetylaseSuccinyldiaminopimelate desuccinylase and related deacylases. (113 aa)    
Predicted Functional Partners:
BF49_4500
Acetylornithine deacetylaseSuccinyldiaminopimelate desuccinylase and related deacylases.
     0.993
BF49_0040
Bll0789 putative carboxypeptidase EC 341711.
  
     0.763
BF49_7362
Bll0789 putative carboxypeptidase EC 341711.
  
     0.763
BF49_1296
Glutamate carboxypeptidase EC 341711.
  
     0.725
BF49_0680
Tricarboxylate transport protein TctB.
  
     0.539
glmS
Glucosaminefructose6phosphate aminotransferase isomerizing EC 26116; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.536
BF49_5635
Tricarboxylate transport protein TctB.
  
     0.524
BF49_1404
Peptide/nickel transport system substrate-binding protein; Dipeptidebinding ABC transporter periplasmic substratebinding component TC 3A152 Putative heminbinding lipoprotein.
  
     0.493
BF49_5467
2oxo4hydroxy4carboxy5ureidoimidazoline OHCU decarboxylase 5Hydroxyisourate Hydrolase HIUase EC 35217.
    
 0.488
BF49_6304
Glyoxalasebleomycin resistance proteindioxygenase.
  
   0.487
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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