Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4571Salicylate hydroxylase EC 114131. (460 aa)    
Predicted Functional Partners:
BF49_1812
NADPHcytochrome P450 reductase.
 
 0.882
BF49_7226
FIG00440594 hypothetical protein.
   
 0.842
BF49_2158
Probable RuBisCoexpression protein CbbX.
    
 0.813
BF49_2022
Putative cytochrome P450 hydroxylase.
  
 0.809
BF49_1839
Putative cytochrome P450 hydroxylase.
  
 0.802
BF49_6347
Putative cytochrome P450 hydroxylase.
  
 0.800
BF49_3632
Hypothetical protein.
   
 
 0.799
BF49_4217
Mll6489 protein.
   
 
 0.799
BF49_7144
Fatty acid hydroxylaselike protein.
   
 
 0.799
BF49_1210
Putative cytochrome P450 hydroxylase.
  
 0.795
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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