Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BF49_4594Uridine phosphorylase EC 2423. (188 aa)    
Predicted Functional Partners:
BF49_1575
Thymidine phosphorylase EC 2424.
  
 
 0.826
deoB
Phosphopentomutase EC 5427; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
  
 
 0.651
mtnP
5methylthioadenosine phosphorylase EC 24228; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
    
 0.609
pyrD
Dihydroorotate dehydrogenase EC 1331; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
    
 0.600
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
    
  0.568
BF49_6871
Probable Cytidine deaminase EC 3545.
     
 0.545
surE
5nucleotidase SurE EC 3135; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.517
ade
Adenine deaminase EC 3542; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
    
  0.503
BF49_5468
Xanthine dehydrogenase molybdenum binding subunit EC 11714.
    
  0.500
BF49_3172
Glutamate synthase NADPH small chain EC 14113.
    
  0.469
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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