Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4596Copper tolerance protein. (154 aa)    
Predicted Functional Partners:
BF49_2719
Multicopper oxidase.
 
  
 0.910
BF49_4597
CopG protein.
 
  
 0.838
BF49_2718
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA.
 
     0.792
BF49_2721
Hypothetical protein.
 
     0.791
BF49_4595
Hypothetical protein.
       0.756
BF49_0870
Multicopper oxidase.
 
  
 0.686
BF49_6613
Multicopper oxidase.
 
  
 0.665
BF49_4443
Coppercontaining nitrite reductase EC 1721; Belongs to the multicopper oxidase family.
  
  
 0.638
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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