STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4605ABCtype antimicrobial peptide transport system permease component. (787 aa)    
Predicted Functional Partners:
BF49_4604
ABCtype antimicrobial peptide transport system ATPase component.
 
 0.989
BF49_4606
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.962
BF49_6324
Cell division transporter ATPbinding protein FtsE TC 3A511.
  
 0.811
BF49_6964
Methionine ABC transporter ATPbinding protein.
  
 0.811
lolD
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.795
lolD-2
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.795
BF49_7185
AttE component of AttEFGH ABC transport system.
  
 0.795
BF49_4603
Cytochrome c biogenesis protein.
       0.773
BF49_4602
Bll7991 protein.
       0.747
BF49_4601
Bsl7992 protein.
       0.741
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.