Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_4608YbbL ABC transporter ATPbinding protein. (198 aa)    
Predicted Functional Partners:
BF49_4607
YbbM seven transmembrane helix protein.
 
 0.985
BF49_4522
YbbM seven transmembrane helix protein.
 
 0.961
BF49_4609
Hypothetical protein.
 
     0.807
lolD
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  
 
0.637
lolD-2
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  
 
0.635
BF49_6964
Methionine ABC transporter ATPbinding protein.
  
  
 
0.611
BF49_7185
AttE component of AttEFGH ABC transport system.
  
  
 
0.611
BF49_3928
Molybdenum transport ATPbinding protein ModC TC 3A181; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
  
  
 
0.606
BF49_4604
ABCtype antimicrobial peptide transport system ATPase component.
  
  
 
0.605
BF49_6324
Cell division transporter ATPbinding protein FtsE TC 3A511.
  
  
 
0.605
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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