STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4613FIG00440335 hypothetical protein. (300 aa)    
Predicted Functional Partners:
BF49_4612
Hypothetical protein.
       0.737
BF49_2517
Protein gp47 recombinationrelated Bacteriophage A118.
  
     0.717
BF49_2692
FIG00440014 hypothetical protein.
  
     0.691
BF49_1946
FIG135464 Cytochrome c4.
  
     0.676
BF49_4609
Hypothetical protein.
 
     0.669
BF49_1596
Hypothetical protein.
 
     0.658
BF49_1080
Antitoxin 1.
  
     0.642
BF49_2370
Hypothetical protein.
  
     0.592
BF49_4611
Hypothetical protein.
  
    0.579
BF49_5180
FIG00439865 hypothetical protein.
  
     0.579
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.