STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4706Manganese transport protein MntH. (436 aa)    
Predicted Functional Partners:
BF49_3196
Zinc ABC transporter inner membrane permease protein ZnuB.
  
  
 0.701
pxpA
Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.471
BF49_6320
FIG00439495 hypothetical protein.
 
 
 0.468
BF49_3197
Zinc ABC transporter ATPbinding protein ZnuC.
  
  
 0.455
BF49_1770
FIG00444536 hypothetical protein; Belongs to the D-glutamate cyclase family.
  
    0.446
BF49_4707
Hypothetical protein.
       0.426
BF49_6360
Arsenic efflux pump protein.
  
     0.417
BF49_3195
Zinc ABC transporter periplasmicbinding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.408
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.