STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4717Omethyltransferase family 2. (341 aa)    
Predicted Functional Partners:
BF49_5072
Phytoene dehydrogenase EC 11499.
 
 
 0.766
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.694
BF49_6971
Hypothetical protein.
   
 0.673
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
    
 0.646
BF49_7240
Octaprenyl diphosphate synthase EC 25190 Dimethylallyltransferase EC 2511 2E6Efarnesyl diphosphate synthase EC 25110 Geranylgeranyl diphosphate synthase EC 25129; Belongs to the FPP/GGPP synthase family.
  
 0.591
cysC
Sulfate adenylyltransferase subunit 1 EC 2774 Adenylylsulfate kinase EC 27125; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
 
 0.537
gcvP
Glycine dehydrogenase decarboxylating glycine cleavage system P protein EC 1442; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.515
BF49_1690
Phytoene synthase EC 25132.
 
  
 0.489
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.486
pdxH
Pyridoxamine 5phosphate oxidase EC 1435; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
   
 
 0.475
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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