Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4776Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family. (607 aa)    
Predicted Functional Partners:
BF49_4777
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 0.990
BF49_4778
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
 
 0.986
BF49_4775
Branchedchain amino acid ABC transporter amino acidbinding protein TC 3A141.
 
 
 0.983
BF49_4169
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 0.960
BF49_4064
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 0.958
BF49_5976
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 0.952
BF49_5189
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 0.943
BF49_5696
Benzoate transport ATPase component.
 
 0.942
BF49_4065
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
 
 0.940
BF49_4168
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
 
 0.940
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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