STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4779HoxNHupNNixA family nickelcobalt transporter; Belongs to the NiCoT transporter (TC 2.A.52) family. (343 aa)    
Predicted Functional Partners:
BF49_4780
NicelCobaltspecific TonBdependent outer membrane receptor.
     
 0.682
BF49_1429
Precorrin-6Y C5,15-methyltransferase (decarboxylating); Cobaltprecorrin6y C5methyltransferase EC 211 Cobaltprecorrin6y C15methyltransferase decarboxylating EC 211.
 
     0.472
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
       0.468
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
   
 0.449
ureC
Urease alpha subunit EC 3515.
 
   
 0.432
ureB
Urease beta subunit EC 3515; Belongs to the urease beta subunit family.
 
   
 0.430
BF49_4778
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
       0.429
BF49_4777
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
       0.415
BF49_4775
Branchedchain amino acid ABC transporter amino acidbinding protein TC 3A141.
       0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.