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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4779HoxNHupNNixA family nickelcobalt transporter; Belongs to the NiCoT transporter (TC 2.A.52) family. (343 aa)    
Predicted Functional Partners:
BF49_4780
NicelCobaltspecific TonBdependent outer membrane receptor.
       0.667
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.504
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
       0.467
BF49_4778
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
       0.428
BF49_4777
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
       0.415
ureC
Urease alpha subunit EC 3515.
 
  
 0.408
BF49_4775
Branchedchain amino acid ABC transporter amino acidbinding protein TC 3A141.
       0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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