STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flbTFlagellar basalbody rod modification protein FlgD; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation. (136 aa)    
Predicted Functional Partners:
BF49_4819
Flagellar protein FlaF.
 
  
 0.993
BF49_4817
Flagellar hookassociated protein FlgK.
 
  
 0.964
BF49_4816
Flagellar hookassociated protein FlgK.
 
  
 0.963
BF49_4818
Flagellar hookassociated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.959
BF49_4826
Flagellar protein FlgJ peptidoglycan hydrolase EC 321.
 
  
 0.941
fliQ
Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.934
BF49_4809
Flagellar Mring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.924
BF49_4815
Flagellar hook protein FlgE.
 
  
 0.924
BF49_4821
Flagellar basalbody rod modification protein FlgD.
 
  
 0.905
BF49_4824
Flagellar biosynthesis protein FliR.
 
  
 0.901
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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