Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4827Hypothetical protein. (154 aa)    
Predicted Functional Partners:
BF49_4828
Mlr2967 protein.
 
   
 0.965
BF49_4826
Flagellar protein FlgJ peptidoglycan hydrolase EC 321.
 
   
 0.917
BF49_4824
Flagellar biosynthesis protein FliR.
 
     0.881
BF49_4819
Flagellar protein FlaF.
 
     0.875
flbT
Flagellar basalbody rod modification protein FlgD; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
     0.875
BF49_4818
Flagellar hookassociated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.866
BF49_4817
Flagellar hookassociated protein FlgK.
 
     0.849
BF49_4816
Flagellar hookassociated protein FlgK.
 
     0.844
BF49_4810
Hypothetical protein.
 
   
 0.829
BF49_4814
FIG016425 Soluble lytic murein transglycosylase and related regulatory proteins some contain LysMinvasin domains.
 
     0.823
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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