STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4833Dienelactone hydrolase family. (295 aa)    
Predicted Functional Partners:
BF49_1390
Alcohol dehydrogenase EC 1111.
  
 
 0.948
BF49_7192
Alcohol dehydrogenase EC 1111.
  
 
 0.945
BF49_1393
Catechol 12dioxygenase EC 113111.
   
 
 0.930
BF49_1887
Catechol 12dioxygenase EC 113111.
   
 
 0.930
BF49_5564
FIG00440890 hypothetical protein.
  
  
 0.591
BF49_4832
Permeases of the major facilitator superfamily.
       0.518
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.