STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4842Lidonate 5dehydrogenase EC 111264. (332 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase EC 4218; Catalyzes the dehydration of D-mannonate.
 
  
 0.842
BF49_4033
5aminolevulinate synthase EC 23137.
  
 
 0.758
BF49_6355
5ketoDgluconate 5reductase EC 11169.
 
 
 0.697
BF49_4840
TRAPtype transport system small permease component predicted Nacetylneuraminate transporter.
     
 0.654
BF49_4841
TRAPtype transport system large permease component predicted Nacetylneuraminate transporter.
     
 0.635
BF49_6971
Hypothetical protein.
  
 
 0.614
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.593
xylB
Xylulose kinase EC 27117.
 
 
 0.589
xylB-2
Xylulose kinase EC 27117.
 
 
 0.587
BF49_0969
Alcohol dehydrogenase.
 
0.571
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.