STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4848Sulfopyruvate decarboxylase beta subunit EC 41179. (194 aa)    
Predicted Functional Partners:
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 0.991
BF49_1964
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 0.952
BF49_3115
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 0.952
BF49_4847
Sulfopyruvate decarboxylase alpha subunit EC 41179.
 
     0.952
BF49_6292
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 0.952
BF49_6293
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 0.952
BF49_1838
Sulfopyruvate decarboxylase alpha subunit EC 41179.
 
     0.798
BF49_1509
Sulfopyruvate decarboxylase alpha subunit EC 41179.
 
     0.792
mobA
Molybdopteringuanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
  
 0.756
BF49_0621
4Fe4S ferredoxin ironsulfur binding; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.752
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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