Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4853Hypothetical metabolite transport protein. (435 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
   
 0.670
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
    
 0.666
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.659
BF49_6358
FIG00447210 hypothetical protein.
  
   
 0.515
BF49_1363
FIG00441021 hypothetical protein.
     
  0.471
BF49_1364
FIG00440581 hypothetical protein.
     
  0.471
BF49_3278
XoxI.
     
  0.471
BF49_6821
XoxI.
     
  0.471
BF49_5085
FIG00444528 hypothetical protein.
    
  0.454
BF49_4301
NADPHdependent glyceraldehyde3phosphate dehydrogenase EC 12113 NADdependent glyceraldehyde3phosphate dehydrogenase EC 12112; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.440
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (24%) [HD]