Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4862Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
BF49_1275
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.713
BF49_4095
Glycine cleavage system transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family.
  
     0.659
BF49_2894
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.644
BF49_1388
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.614
BF49_3117
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.613
BF49_3093
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.612
BF49_1910
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.607
BF49_0070
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.600
BF49_3162
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.599
BF49_4324
LysRfamily transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.595
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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