Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_4885Alphaamylase EC 3211. (445 aa)    
Predicted Functional Partners:
glgB
14alphaglucan glycogen branching enzyme GH13type EC 24118; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.996
BF49_4886
Alphaamylase EC 3211.
     0.994
BF49_4884
Trehalose synthase EC 549916.
 
 0.990
BF49_4887
4alphaglucanotransferase amylomaltase EC 24125.
 
 
 0.990
BF49_4882
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.970
glgA-2
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.964
glgA
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.961
BF49_4881
Maltooligosyltrehalose trehalohydrolase EC 321141.
 
 
 0.956
BF49_4880
Maltooligosyltrehalose synthase EC 549915.
 
 
 0.950
BF49_4762
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.885
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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