Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4888Glucoamylase EC 3213. (600 aa)    
Predicted Functional Partners:
BF49_4884
Trehalose synthase EC 549916.
 
  
 0.841
BF49_0518
Alphaalphatrehalosephosphate synthase UDPforming EC 24115.
 
  
 0.822
BF49_0517
Trehalose6phosphate phosphatase EC 31312; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.818
BF49_4887
4alphaglucanotransferase amylomaltase EC 24125.
    
 0.815
BF49_2031
Alphaalphatrehalosephosphate synthase UDPforming EC 24115.
 
  
 0.793
BF49_4885
Alphaamylase EC 3211.
 
  
 0.764
BF49_4886
Alphaamylase EC 3211.
 
  
 0.760
BF49_4880
Maltooligosyltrehalose synthase EC 549915.
 
  
 0.693
BF49_4882
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
    
 0.654
BF49_4881
Maltooligosyltrehalose trehalohydrolase EC 321141.
 
  
 0.577
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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