Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_4896Serine protein kinase prkA protein Ploop containing. (647 aa)    
Predicted Functional Partners:
BF49_4897
UPF0229 protein YeaH; Belongs to the UPF0229 family.
 
  
 0.990
BF49_4898
FIG004684 SpoVRlike protein.
 
  
 0.990
BF49_2885
Starvation-inducible DNA-binding protein; Nonspecific DNAbinding protein Dps Ironbinding ferritinlike antioxidant protein Ferroxidase EC 11631; Belongs to the Dps family.
   
    0.781
BF49_2120
Oxidoreductase aldoketo reductase family.
   
    0.746
BF49_6399
Methylglyoxal reductase acetol producing EC 111 25diketoDgluconic acid reductase B EC 111274.
   
    0.746
glgA
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.732
glgA-2
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.732
BF49_1873
InterPro IPR001395 COGs COG0656.
   
    0.711
BF49_0517
Trehalose6phosphate phosphatase EC 31312; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.688
BF49_5322
Osmotically inducible protein.
   
  
 0.664
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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