Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4903Transcriptional regulator ArsR family. (108 aa)    
Predicted Functional Partners:
BF49_4902
Uncharacterized conserved protein.
 
  
 0.955
BF49_6338
Probable glutathione Stransferaserelated transmembrane protein EC 25118.
 
  
 0.772
BF49_4900
FIG00453449 hypothetical protein.
 
     0.769
BF49_4901
Hypothetical protein.
 
     0.765
BF49_2869
Transcriptional regulator ArsR family.
  
     0.716
BF49_5994
Hypothetical protein.
 
  
 0.658
BF49_4904
Blr3520 protein homolog hypothetical protein.
       0.447
BF49_0269
Transcriptional regulator ArsR family.
 
  
 0.426
BF49_6452
Arsenical pumpdriving ATPase EC 36316; Anion-transporting ATPase; Belongs to the arsA ATPase family.
    
 0.423
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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