STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4922Muconolactone isomerase EC 5334putative; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (389 aa)    
Predicted Functional Partners:
BF49_2826
2dehydro3deoxygalactonokinase EC 27158.
 
 
 0.674
BF49_5510
2dehydro3deoxyphosphogalactonate aldolase EC 41221 6phospho2dehydro3deoxygalactonate aldolase 2 oxo3deoxygalactonate 6phosphate aldolase Galactonate dehydratase EC 4216; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.643
BF49_4837
Dmannonate oxidoreductase EC 11157.
 
  
 0.634
BF49_5761
Dgalactarate dehydratase EC 42142.
 
  
 0.536
BF49_5093
Tartrate dehydrogenase EC 11193 Tartrate decarboxylase EC 41173 Dmalic enzyme EC 11183.
 
     0.520
BF49_4920
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
       0.506
BF49_4921
FIG00440048 hypothetical protein.
       0.506
BF49_4919
Indoleacetamide hydrolase EC 351; Belongs to the amidase family.
       0.505
BF49_1775
Tartrate dehydrogenase EC 11193 Tartrate decarboxylase EC 41173 Dmalic enzyme EC 11183.
 
     0.490
BF49_1133
2dehydro3deoxygluconate kinase EC 27145.
    
 0.483
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.