STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4942Polybetahydroxyalkanoate depolymerase. (407 aa)    
Predicted Functional Partners:
BF49_0692
Polyhydroxyalkanoic acid synthase.
 
  
 0.970
BF49_5562
Polyhydroxyalkanoic acid synthase.
 
  
 0.967
BF49_1807
Polyhydroxyalkanoic acid synthase.
 
  
 0.957
BF49_7278
Intracellular PHB depolymerase EC 311.
  
  
 
0.906
BF49_0552
PhbF.
 
   
 0.636
BF49_4943
Glutathione Stransferase EC 25118.
 
     0.621
clpX
ATPdependent Clp protease ATPbinding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
   
    0.517
BF49_6476
Ferredoxin reductase.
  
     0.513
BF49_0554
AcetoacetylCoA reductase EC 11136.
  
   
 0.435
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.