STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4946Gluconate dehydratase EC 42139. (367 aa)    
Predicted Functional Partners:
BF49_4394
Pyruvate kinase EC 27140; Belongs to the pyruvate kinase family.
     
 0.691
pckA
Phosphoenolpyruvate carboxykinase ATP EC 41149; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
     
  0.632
BF49_2826
2dehydro3deoxygalactonokinase EC 27158.
 
 
 0.630
BF49_5943
Putative 24dihydroxyhept2ene17dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.533
BF49_4947
Transcriptional regulator AraC family.
       0.515
BF49_2094
Phosphoglycerate mutase family Rhiz.
    
  0.514
BF49_4747
Gluconolactonase EC 31117.
 
  
 0.509
gpmA
Phosphoglycerate mutase EC 5421; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 
  0.506
BF49_2250
Pyruvatephosphate dikinase EC 2791.
     
  0.493
BF49_2825
2dehydro3deoxyphosphogalactonate aldolase EC 41221.
 
   
 0.489
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.