STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4953FIG00439488 hypothetical protein. (391 aa)    
Predicted Functional Partners:
BF49_4951
ATPase associated with various cellular activities AAA 5.
 
    0.894
BF49_4954
Rhodaneserelated sulfurtransferase.
       0.670
BF49_1369
Carbon monoxide dehydrogenase D protein.
 
    0.627
BF49_5488
Carbon monoxide dehydrogenase D protein.
 
    0.595
BF49_4952
Transglycosylase associated gene.
       0.586
BF49_5986
Carbon monoxide oxidation accessory protein CoxD.
 
    0.511
BF49_2069
AcylCoA dehydrogenase EC 1387.
  
     0.474
BF49_3995
AcylCoA dehydrogenase EC 1387.
  
     0.459
BF49_4955
Thiosulfate sulfurtransferase rhodanese EC 2811.
       0.418
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.