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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4968Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (162 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase protoheme ferrolyase EC 49911; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.930
BF49_4967
Bsl6681 protein.
  
 
 0.904
BF49_0769
Twocomponent hybrid sensor and regulator.
   
  
 0.807
BF49_1875
Assimilatory nitrate reductase large subunit EC17994; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.765
BF49_4342
Opine oxidase subunit A.
  
 
 0.755
BF49_0756
Twocomponent sensor histidine kinase.
   
  
 0.730
BF49_3297
FIG00803871 hypothetical protein.
   
  
 0.612
BF49_3843
Hypothetical protein.
   
  
 0.612
BF49_3846
Hypothetical protein.
   
  
 0.612
BF49_3862
Hypothetical protein.
   
  
 0.612
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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