STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4983Endoribonuclease LPSP. (128 aa)    
Predicted Functional Partners:
BF49_6743
Bona fide RidAYjgFTdcFRutC subgroup.
  
     0.768
BF49_4344
RidAYER057cUK114 superfamily group 2 YoaBlike protein.
 
   
 0.649
BF49_6805
Threonine dehydratase EC 43119.
 
 0.594
BF49_6440
Endoribonuclease LPSP.
  
     0.543
BF49_4982
Hypothetical protein.
       0.481
BF49_5743
Threonine dehydratase catabolic EC 43119.
 
 0.481
BF49_5312
Hypothetical protein.
 
   
 0.461
BF49_4185
Threonine dehydratase EC 43119.
 
 0.459
BF49_5559
Putative translation initiation inhibitor yjgF family.
  
     0.437
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.