STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4986Ribitol 2dehydrogenase EC 11156. (244 aa)    
Predicted Functional Partners:
BF49_1460
Dribulokinase EC 27147.
 
  
 0.960
BF49_6971
Hypothetical protein.
  
 
 0.760
BF49_4111
Gluconate 5dehydrogenase EC 11169.
 
 
  0.672
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 
 0.663
BF49_5668
Legionaminic acid biosynthesis protein PtmA.
 
 
  0.658
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.655
BF49_2670
Hypothetical oxidoreductase.
 
 
  0.641
BF49_1381
Putative oxidoreductase in arabinose utilization cluster.
 
 
  0.603
BF49_0642
3oxoacylacylcarrier protein reductase EC 111100.
 
 
  0.597
BF49_1668
Enoylacylcarrierprotein reductase NADPH EC 13110.
 
 
  0.569
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.