STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4990Aerobic cobaltochelatase CobT subunit EC 6612. (517 aa)    
Predicted Functional Partners:
BF49_0603
Aerobic cobaltochelatase CobS subunit EC 6612.
 
 
 0.993
cobB
Cobyrinic acid ACdiamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
  0.959
BF49_1435
CobN component of cobalt chelatase involved in B12 biosynthesis.
     
 0.956
BF49_0606
Aerobic cobaltochelatase CobT subunit EC 6612.
  
  
 
0.921
BF49_1438
CobIalamin adenosyltransferase EC 25117; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
 0.903
BF49_3287
ATPCobIalamin adenosyltransferase EC 25117; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.902
BF49_2828
4hydroxyphenylacetate 3monooxygenase reductase component EC 168.
     
  0.900
BF49_3592
Hypothetical protein.
  
     0.656
BF49_0596
FIG003437 hypothetical with DnaJlike domain.
 
     0.650
BF49_4989
GTU mismatchspecific uracilthymine DNAglycosylase.
       0.644
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.