Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5026Taurinebinding periplasmic protein TauA. (336 aa)    
Predicted Functional Partners:
BF49_5025
Taurine transport system permease protein TauC.
 
 
 0.998
BF49_5330
ABC transporter permease protein.
 
 
 0.955
BF49_5837
Alkanesulfonates transport system permease protein.
 
 
 0.944
BF49_5543
ABC transporter permease protein.
 
 
 0.935
BF49_0467
Taurine transport system permease protein TauC.
 
 
 0.925
BF49_1494
Alkanesulfonates transport system permease protein.
 
 
 0.921
BF49_7267
Alkanesulfonates transport system permease protein.
 
 
 0.917
BF49_5380
Alkanesulfonates transport system permease protein.
 
 
 0.914
BF49_5389
Alkanesulfonates transport system permease protein.
 
 
 0.914
BF49_0844
Hydroxymethylpyrimidine ABC transporter transmembrane component.
 
 
 0.911
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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